Route 99 – Oakland • Emeryville • San Francisco Home » Route 99 – Oakland • Emeryville • San Francisco Route 99 - Oakland • Emeryville • San Francisco San Joaquin Connecting Train Number (Westbound) 711 713 715 717 719 Thruway Number 6611 6613 6615 6617 6619 Days of Operation Daily Daily Daily Daily Daily Emeryville, CA - Amtrak Station (map) 10:15A 2:20P 6:25P 8:20P 10:20P San Francisco, CA - 555 Mission St. (map) 10:45A 2:50P 6:55P 8:50P 10:45P San Joaquin Connecting Train Number (Westbound) 710 712 714 716 718 Thruway Number 6610 6612 6614 6616 6668 Days of Operation Daily Daily Daily Daily Daily Emeryville, CA - Amtrak Station (map) 7:30A 9:30A 11:30A 1:20P 5:30P San Francisco, CA - 555 Mission St. (map) 7:00A 9:00A 11:00A 12:50P 4:50P