Route 6 - Stockton • San Jose • Santa Cruz
| Thruway Number | 6900 | 3910 | 6916 | 6982 | 3916 | 3204 ACE 04 | 6942 | 3218 ACE 06 | 6924 | 3278 ACE 08 |
| Days of Operation | M-F | Daily | M-F | SaSuHo | Daily | Daily | M-F | M-F | M-F | M-F |
| Stockton, CA - San Joaquin Street Station (map) | - | 8:25A | - | - | 3:05P | - | - | 7:23P | - | - |
| Stockton, CA - ACE Station (map) | - | - | - | - | - | 5:47P | - | 7:00P | - | 7:47P |
| Lathrop-Manteca, CA - ACE Station (map) | - | - | - | - | - | 5:23P | - | 6:23P | - | 7:23P |
| Tracy, CA - Wendy's Restaurant (map) | - | 7:45A | - | - | 1:50P | - | - | - | - | - |
| Tracy, CA - ACE Station (map) | - | - | - | - | - | 5:11P | - | 6:11P | - | 7:11P |
| Vasco, CA - ACE Station (map) | - | - | - | - | - | 4:42P | - | 5:42P | - | 6:42P |
| Livermore, CA - Transit Center (map) | - | 7:20A | - | - | 1:25P | 4:37P | - | 5:37P | - | 6:37P |
| Dublin-Pleasanton, CA-BART (map) | - | 7:05A | - | - | 1:10P | - | - | - | - | - |
| Pleasanton, CA - ACE Station (map) | - | - | - | - | - | 4:28P | - | 5:28P | - | 6:28P |
| Fremont, CA - Amtrak ACE (map) | - | - | - | - | - | 4:05P | - | 5:05P | - | 6:05 |
| Fremont, CA - Park N Ride (map) | - | 6:45A | - | - | 12:50P | - | - | - | - | - |
| Great America, CA - Amtrak ACE (map) | - | - | - | - | - | 3:49P | - | 4:49P | - | 5:49P |
| Santa Clara, CA - Caltrain (map) | - | - | - | - | - | 3:40P | - | 4:40P | - | 5:40P |
| San Jose, CA - Amtrak Station (Leaving) - Amtrak Station Arrival) (map) | - 5:38A | 6:10A - | - 12:00P | - 11:43A | 12:25P - | 3:35P - | - 4:04P | 4:35P - | - 5:01P | 5:35P - |
| Scotts Valley, CA - Transit Center (map) | 4:54A | - | 11:16A | 10:59A | - | - | 3:17P | - | - | - |
| Santa Cruz, CA - Metro Center (map) | 4:40A | - | 11:00A | 10:45A | - | - | 3:00P | - | 4:00P | - |
| Thruway Number | 6925 | 3911 6911 | 3911 6977 | 3915 6815 | 3915 6957 |
| Days of Operation | M-F | Daily | Daily | Daily | Daily |
| Stockton, CA - San Joaquin Street Station (map) | - | 8:45A | 8:45A | 4:45P | 4:45P |
| Stockton, CA - ACE Station (map) | 7:05A | - | - | - | - |
| Lathrop-Manteca, CA - ACE Station (map) | 7:24A | - | - | - | - |
| Tracy, CA - Wendy's Restaurant (map) | - | - | - | 5:10P | 5:10P |
| Tracy, CA - ACE Station (map) | 7:36A | 9:05A | 9:05A | - | - |
| Vasco, CA - ACE Station (map) | 8:05A | - | - | - | - |
| Livermore, CA - Transit Center (map) | 8:10A | - | - | 5:40P | 5:40P |
| Dublin-Pleasanton, CA-BART (map) | - | 9:35A | 9:35A | 5:50P | 5:50P |
| Pleasanton, CA - ACE Station (map) | 8:18A | 9:45A | 9:45A | - | - |
| Fremont, CA - Amtrak ACE (map) | 8:40A | - | - | - | - |
| Fremont, CA - Park N Ride (map) | - | - | - | 6:05P | 6:05P |
| Great America, CA - Amtrak ACE (map) | 8:58A | 10:00A | 10:00A | - | - |
| Santa Clara, CA - Caltrain (map) | 9:05A | - | - | - | - |
| San Jose, CA - Amtrak Station (Arrive) - Amtrak Station (Depart) (map) | 9:17A 9:45A | 10:35A 11:50A | 10:35A 11:30A | 6:35P 6:55P | 6:35P 7:15P |
| Scotts Valley, CA - Transit Center (map) | 10:27A | - | 12:22P | 7:37P | - |
| Santa Cruz, CA - Metro Center (map) | 10:43A | 12:38P | 12:41P | 7:51P | 8:02P |
- On Train 711 Bus 6977 (SaSuHo) Operates 20 minutes earlier than weekdays.
- On Train 701/713 Bus 6985 (SaSuHo) Operates 10 minutes earlier than weekdays.
- On Train 715 Bus 6957 (SaSuHo) Operates 20 minutes later than weekdays.
- On Train 719's final stop is University Station.